Protein–RNA interactions for Protein: P20783

NTF3, Neurotrophin-3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3P20783 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NTF3P20783 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.39□□□□□ -0.43
NTF3P20783 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.39□□□□□ -0.43
NTF3P20783 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.39□□□□□ -0.43
NTF3P20783 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.39□□□□□ -0.43
NTF3P20783 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
NTF3P20783 AL390719.2-201ENST00000606993 987 ntBASIC12.39□□□□□ -0.43
NTF3P20783 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.39□□□□□ -0.43
NTF3P20783 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
NTF3P20783 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.39□□□□□ -0.43
NTF3P20783 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NTF3P20783 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 Z83836.1-201ENST00000624605 1642 ntBASIC12.38□□□□□ -0.43
NTF3P20783 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 TSPY15P-201ENST00000457163 923 ntBASIC12.38□□□□□ -0.43
NTF3P20783 COX11P1-201ENST00000489116 835 ntBASIC12.38□□□□□ -0.43
NTF3P20783 GUSBP12-201ENST00000513727 720 ntBASIC12.38□□□□□ -0.43
NTF3P20783 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.38□□□□□ -0.43
NTF3P20783 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.38□□□□□ -0.43
NTF3P20783 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NTF3P20783 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NTF3P20783 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NTF3P20783 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.38□□□□□ -0.43
NTF3P20783 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NTF3P20783 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms