Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 SPDYE21P-201ENST00000413323 827 ntBASIC16.81■□□□□ 0.28
H2AFXP16104 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.81■□□□□ 0.28
H2AFXP16104 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 GUSBP12-201ENST00000513727 720 ntBASIC16.81■□□□□ 0.28
H2AFXP16104 AC009533.2-201ENST00000543664 586 ntBASIC16.81■□□□□ 0.28
H2AFXP16104 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.81■□□□□ 0.28
H2AFXP16104 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.81■□□□□ 0.28
H2AFXP16104 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
H2AFXP16104 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2AFXP16104 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2AFXP16104 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
H2AFXP16104 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
H2AFXP16104 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
H2AFXP16104 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H2AFXP16104 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 AC092135.3-201ENST00000624151 1846 ntBASIC16.8■□□□□ 0.28
H2AFXP16104 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.8■□□□□ 0.28
H2AFXP16104 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.8■□□□□ 0.28
H2AFXP16104 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.8■□□□□ 0.28
H2AFXP16104 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
H2AFXP16104 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.8■□□□□ 0.28
H2AFXP16104 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.8■□□□□ 0.28
H2AFXP16104 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.8■□□□□ 0.28
H2AFXP16104 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 AL353135.1-201ENST00000606729 504 ntBASIC16.8■□□□□ 0.28
H2AFXP16104 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
H2AFXP16104 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
H2AFXP16104 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.8■□□□□ 0.28
H2AFXP16104 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
H2AFXP16104 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2AFXP16104 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
H2AFXP16104 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 NCF1C-201ENST00000438382 1427 ntBASIC16.79■□□□□ 0.28
H2AFXP16104 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.79■□□□□ 0.28
H2AFXP16104 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
H2AFXP16104 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.79■□□□□ 0.28
H2AFXP16104 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.79■□□□□ 0.28
H2AFXP16104 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.79■□□□□ 0.28
H2AFXP16104 AL441883.1-201ENST00000566170 1045 ntBASIC16.79■□□□□ 0.28
H2AFXP16104 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
H2AFXP16104 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2AFXP16104 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.79■□□□□ 0.28
H2AFXP16104 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms