Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.05■□□□□ 0.48
COL11A1P12107 MIR4525-201ENST00000580000 75 ntBASIC18.05■□□□□ 0.48
COL11A1P12107 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.05■□□□□ 0.48
COL11A1P12107 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL11A1P12107 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
COL11A1P12107 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
COL11A1P12107 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL11A1P12107 ACTG1P3-201ENST00000431775 1114 ntBASIC18.05■□□□□ 0.48
COL11A1P12107 AC093433.1-201ENST00000458048 571 ntBASIC18.05■□□□□ 0.48
COL11A1P12107 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.05■□□□□ 0.48
COL11A1P12107 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.05■□□□□ 0.48
COL11A1P12107 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.04■□□□□ 0.48
COL11A1P12107 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 BCRP2-202ENST00000447763 634 ntBASIC18.04■□□□□ 0.48
COL11A1P12107 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 BCRP6-201ENST00000510112 632 ntBASIC18.04■□□□□ 0.48
COL11A1P12107 BCRP7-201ENST00000511549 544 ntBASIC18.04■□□□□ 0.48
COL11A1P12107 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.04■□□□□ 0.48
COL11A1P12107 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.04■□□□□ 0.48
COL11A1P12107 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 AC022188.1-201ENST00000620960 1664 ntBASIC18.04■□□□□ 0.48
COL11A1P12107 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COL11A1P12107 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
COL11A1P12107 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL11A1P12107 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
COL11A1P12107 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.03■□□□□ 0.48
COL11A1P12107 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
COL11A1P12107 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL11A1P12107 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 FAM21FP-201ENST00000426241 1131 ntBASIC18.03■□□□□ 0.48
COL11A1P12107 KRT43P-201ENST00000434019 910 ntBASIC18.03■□□□□ 0.48
COL11A1P12107 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.03■□□□□ 0.48
COL11A1P12107 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.03■□□□□ 0.48
COL11A1P12107 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.03■□□□□ 0.48
COL11A1P12107 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.03■□□□□ 0.48
COL11A1P12107 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.03■□□□□ 0.48
COL11A1P12107 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.03■□□□□ 0.48
COL11A1P12107 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL11A1P12107 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
COL11A1P12107 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COL11A1P12107 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL11A1P12107 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.03■□□□□ 0.48
COL11A1P12107 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.03■□□□□ 0.48
COL11A1P12107 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL11A1P12107 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL11A1P12107 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms