Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 NTF6B-201ENST00000591913 560 ntBASIC12.14□□□□□ -0.47
SMIM17P0DL12 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SMIM17P0DL12 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SMIM17P0DL12 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AC073347.1-201ENST00000421633 2643 ntBASIC12.13□□□□□ -0.47
SMIM17P0DL12 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AC243591.1-201ENST00000452967 1364 ntBASIC12.13□□□□□ -0.47
SMIM17P0DL12 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AC006449.6-201ENST00000612330 2296 ntBASIC12.13□□□□□ -0.47
SMIM17P0DL12 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 GGT3P-204ENST00000453783 1664 ntBASIC12.13□□□□□ -0.47
SMIM17P0DL12 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM17P0DL12 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM17P0DL12 AL731571.1-201ENST00000617058 5428 ntBASIC12.12□□□□□ -0.47
SMIM17P0DL12 KRT18P1-202ENST00000452408 1331 ntBASIC12.12□□□□□ -0.47
SMIM17P0DL12 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM17P0DL12 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM17P0DL12 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms