Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXC4P09017 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXC4P09017 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXC4P09017 HNRNPUP1-201ENST00000554987 333 ntBASIC15.67■□□□□ 0.1
HOXC4P09017 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXC4P09017 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HOXC4P09017 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXC4P09017 AC097359.3-201ENST00000603982 1210 ntBASIC15.67■□□□□ 0.1
HOXC4P09017 LINC01115-203ENST00000606068 577 ntBASIC15.67■□□□□ 0.1
HOXC4P09017 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HOXC4P09017 AL035252.4-201ENST00000624174 288 ntBASIC15.67■□□□□ 0.1
HOXC4P09017 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXC4P09017 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXC4P09017 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXC4P09017 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HOXC4P09017 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXC4P09017 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HOXC4P09017 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXC4P09017 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXC4P09017 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC4P09017 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC4P09017 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 TMEM261P1-201ENST00000604899 340 ntBASIC15.66■□□□□ 0.1
HOXC4P09017 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC4P09017 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC4P09017 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC4P09017 AL596087.1-201ENST00000400979 1969 ntBASIC15.66■□□□□ 0.1
HOXC4P09017 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC4P09017 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HOXC4P09017 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HOXC4P09017 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HOXC4P09017 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC4P09017 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC4P09017 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC4P09017 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
HOXC4P09017 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC4P09017 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HOXC4P09017 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC4P09017 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC4P09017 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HOXC4P09017 DGCR5-201ENST00000399539 862 ntBASIC15.65■□□□□ 0.1
HOXC4P09017 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC4P09017 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC4P09017 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC4P09017 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC4P09017 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC4P09017 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms