Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 NKG7-204ENST00000595217 816 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.86□□□□□ -0.83
APOBP04114 UBALD1-205ENST00000590891 2641 ntBASIC9.86□□□□□ -0.83
APOBP04114 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 BNIP3P1-202ENST00000550043 1585 ntBASIC9.86□□□□□ -0.83
APOBP04114 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
APOBP04114 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC9.86□□□□□ -0.83
APOBP04114 AC005052.1-201ENST00000625181 2492 ntBASIC9.86□□□□□ -0.83
APOBP04114 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.86□□□□□ -0.83
APOBP04114 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
APOBP04114 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 HOMER2P2-201ENST00000451621 847 ntBASIC9.85□□□□□ -0.83
APOBP04114 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 HLA-A-202ENST00000376806 1854 ntBASIC9.85□□□□□ -0.83
APOBP04114 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 NCK2-206ENST00000522586 490 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 AC005730.2-201ENST00000564549 1184 ntBASIC9.85□□□□□ -0.83
APOBP04114 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 AC011491.1-203ENST00000637688 543 ntBASIC9.85□□□□□ -0.83
APOBP04114 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 OS9-205ENST00000413095 1660 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 KRTAP19-9P-201ENST00000421795 191 ntBASIC9.85□□□□□ -0.83
APOBP04114 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 AL596276.2-201ENST00000447525 331 ntBASIC9.85□□□□□ -0.83
APOBP04114 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 AC139713.2-201ENST00000641328 2723 ntBASIC9.85□□□□□ -0.83
APOBP04114 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC9.85□□□□□ -0.83
APOBP04114 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 AL162426.1-201ENST00000624141 743 ntBASIC9.85□□□□□ -0.83
APOBP04114 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC9.85□□□□□ -0.83
APOBP04114 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC9.85□□□□□ -0.83
APOBP04114 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 PCDHB18P-201ENST00000524813 2368 ntBASIC9.85□□□□□ -0.83
APOBP04114 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC9.85□□□□□ -0.83
APOBP04114 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.85□□□□□ -0.83
APOBP04114 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
APOBP04114 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
APOBP04114 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 RN7SL774P-201ENST00000577467 290 ntBASIC9.84□□□□□ -0.83
APOBP04114 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.84□□□□□ -0.83
APOBP04114 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 BAATP1-201ENST00000412284 1225 ntBASIC9.84□□□□□ -0.83
APOBP04114 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms