Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC098831.1-202ENST00000438821 336 ntBASIC14.61□□□□□ -0.07
HLA-DQA2P01906 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 AL160237.2-201ENST00000556165 472 ntBASIC14.61□□□□□ -0.07
HLA-DQA2P01906 U1.21-201ENST00000580816 167 ntBASIC14.61□□□□□ -0.07
HLA-DQA2P01906 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 AL049840.3-201ENST00000602669 611 ntBASIC14.61□□□□□ -0.07
HLA-DQA2P01906 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 U82695.1-201ENST00000635752 1889 ntBASIC14.61□□□□□ -0.07
HLA-DQA2P01906 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DQA2P01906 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 HMGA1P7-201ENST00000406908 502 ntBASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HLA-DQA2P01906 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 PMS2P4-201ENST00000412466 1052 ntBASIC14.59□□□□□ -0.07
HLA-DQA2P01906 VN2R19P-201ENST00000442399 1052 ntBASIC14.59□□□□□ -0.07
HLA-DQA2P01906 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 AP002469.2-201ENST00000531724 424 ntBASIC14.59□□□□□ -0.07
HLA-DQA2P01906 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 AC116407.3-201ENST00000623905 1129 ntBASIC14.59□□□□□ -0.07
HLA-DQA2P01906 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DQA2P01906 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms