Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
TRBV12-3P01733 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 AC010491.1-201ENST00000563101 2797 ntBASIC12.52□□□□□ -0.41
TRBV12-3P01733 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRBV12-3P01733 AC024909.3-201ENST00000611513 2257 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC024267.1-201ENST00000582320 895 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 MIR4453-201ENST00000584019 89 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC018529.1-201ENST00000613063 361 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 AP001059.3-201ENST00000619053 235 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.51□□□□□ -0.41
TRBV12-3P01733 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRBV12-3P01733 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TRBV12-3P01733 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRBV12-3P01733 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRBV12-3P01733 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms