Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.58□□□□□ -0.08
UBL3O95164 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBL3O95164 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBL3O95164 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
UBL3O95164 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 FAM45BP-202ENST00000592932 1624 ntBASIC14.57□□□□□ -0.08
UBL3O95164 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 AC002056.1-201ENST00000395613 760 ntBASIC14.57□□□□□ -0.08
UBL3O95164 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 AC004832.2-201ENST00000426397 482 ntBASIC14.57□□□□□ -0.08
UBL3O95164 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.57□□□□□ -0.08
UBL3O95164 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL3O95164 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 MTDHP5-201ENST00000598980 586 ntBASIC14.57□□□□□ -0.08
UBL3O95164 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 AL009183.1-201ENST00000603760 355 ntBASIC14.57□□□□□ -0.08
UBL3O95164 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBL3O95164 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBL3O95164 SNX33P1-201ENST00000592116 1762 ntBASIC14.57□□□□□ -0.08
UBL3O95164 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 AC013268.4-201ENST00000637413 2228 ntBASIC14.57□□□□□ -0.08
UBL3O95164 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL3O95164 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.57□□□□□ -0.08
UBL3O95164 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.57□□□□□ -0.08
UBL3O95164 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL3O95164 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UBL3O95164 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.56□□□□□ -0.08
UBL3O95164 GGT4P-201ENST00000623672 1708 ntBASIC14.56□□□□□ -0.08
UBL3O95164 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 MCCD1P2-201ENST00000423228 335 ntBASIC14.56□□□□□ -0.08
UBL3O95164 DNAJB3-201ENST00000446806 729 ntBASIC14.56□□□□□ -0.08
UBL3O95164 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.56□□□□□ -0.08
UBL3O95164 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UBL3O95164 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 AL161645.1-201ENST00000622716 1255 ntBASIC14.56□□□□□ -0.08
UBL3O95164 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms