Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ZNF253O75346 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.7□□□□□ -0.38
ZNF253O75346 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.7□□□□□ -0.38
ZNF253O75346 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 AL512652.2-201ENST00000625156 1716 ntBASIC12.69□□□□□ -0.38
ZNF253O75346 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF253O75346 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF253O75346 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
ZNF253O75346 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF253O75346 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF253O75346 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 AP001269.4-201ENST00000609611 512 ntBASIC12.69□□□□□ -0.38
ZNF253O75346 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.69□□□□□ -0.38
ZNF253O75346 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 AL031731.1-201ENST00000642131 2094 ntBASIC12.69□□□□□ -0.38
ZNF253O75346 AC006449.6-201ENST00000612330 2296 ntBASIC12.69□□□□□ -0.38
ZNF253O75346 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF253O75346 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 AC138969.2-201ENST00000532739 9932 ntBASIC12.69□□□□□ -0.38
ZNF253O75346 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF253O75346 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 BX005266.1-201ENST00000473402 457 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 AC139887.3-201ENST00000568585 713 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 AC087388.1-201ENST00000571370 1112 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ZNF253O75346 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 REXO1L3P-201ENST00000622202 1288 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 AC010491.1-201ENST00000563101 2797 ntBASIC12.68□□□□□ -0.38
ZNF253O75346 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 AC131009.4-201ENST00000624048 1740 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms