Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 KRT18P13-201ENST00000400056 1290 ntBASIC14.43□□□□□ -0.1
TRAF3IP2O43734 KRT18P32-201ENST00000424695 1287 ntBASIC14.43□□□□□ -0.1
TRAF3IP2O43734 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAF3IP2O43734 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 FAM58DP-201ENST00000428076 619 ntBASIC14.42□□□□□ -0.1
TRAF3IP2O43734 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AP006288.1-201ENST00000446065 395 ntBASIC14.42□□□□□ -0.1
TRAF3IP2O43734 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AC004835.2-201ENST00000603762 682 ntBASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AC006538.3-201ENST00000612495 578 ntBASIC14.42□□□□□ -0.1
TRAF3IP2O43734 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAF3IP2O43734 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AC008894.3-201ENST00000624324 3103 ntBASIC14.41□□□□□ -0.1
TRAF3IP2O43734 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms