Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 BCAR1-209ENST00000546196 1340 ntBASIC16.15■□□□□ 0.18
PHGDHO43175 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PHGDHO43175 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
PHGDHO43175 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHGDHO43175 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PHGDHO43175 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
PHGDHO43175 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.14■□□□□ 0.17
PHGDHO43175 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 AC092474.2-201ENST00000424288 719 ntBASIC16.14■□□□□ 0.17
PHGDHO43175 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 AC079776.4-201ENST00000511039 504 ntBASIC16.14■□□□□ 0.17
PHGDHO43175 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.14■□□□□ 0.17
PHGDHO43175 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 AL662844.1-201ENST00000546340 181 ntBASIC16.14■□□□□ 0.17
PHGDHO43175 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.14■□□□□ 0.17
PHGDHO43175 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.14■□□□□ 0.17
PHGDHO43175 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.14■□□□□ 0.17
PHGDHO43175 AC004877.2-201ENST00000623941 599 ntBASIC16.14■□□□□ 0.17
PHGDHO43175 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.14■□□□□ 0.17
PHGDHO43175 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHGDHO43175 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PHGDHO43175 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.13■□□□□ 0.17
PHGDHO43175 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.13■□□□□ 0.17
PHGDHO43175 AC073439.1-201ENST00000624121 1774 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 AC104109.2-201ENST00000602919 1418 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 HAUS4P1-201ENST00000406739 1145 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.13■□□□□ 0.17
PHGDHO43175 AC140658.5-201ENST00000438532 169 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.13■□□□□ 0.17
PHGDHO43175 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.13■□□□□ 0.17
PHGDHO43175 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.13■□□□□ 0.17
PHGDHO43175 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PHGDHO43175 AC064836.3-201ENST00000607928 673 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PHGDHO43175 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.13■□□□□ 0.17
PHGDHO43175 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 NORAD-201ENST00000565493 5339 ntBASIC16.13■□□□□ 0.17
PHGDHO43175 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
PHGDHO43175 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.13■□□□□ 0.17
PHGDHO43175 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHGDHO43175 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms