Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.26■□□□□ 0.67
FOXN1O15353 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
FOXN1O15353 AC105021.1-202ENST00000570572 669 ntBASIC19.26■□□□□ 0.67
FOXN1O15353 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 AL662844.4-201ENST00000606367 2838 ntBASIC19.26■□□□□ 0.67
FOXN1O15353 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FOXN1O15353 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
FOXN1O15353 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FOXN1O15353 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXN1O15353 NUS1P3-201ENST00000423502 862 ntBASIC19.25■□□□□ 0.67
FOXN1O15353 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 AC105129.2-201ENST00000559536 390 ntBASIC19.25■□□□□ 0.67
FOXN1O15353 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 MIR8072-201ENST00000614241 80 ntBASIC19.25■□□□□ 0.67
FOXN1O15353 AC128714.1-201ENST00000637035 887 ntBASIC19.25■□□□□ 0.67
FOXN1O15353 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXN1O15353 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXN1O15353 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 FOXO1B-201ENST00000504678 1527 ntBASIC19.25■□□□□ 0.67
FOXN1O15353 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
FOXN1O15353 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXN1O15353 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 AL645728.1-201ENST00000366221 2101 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
FOXN1O15353 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 AL589987.1-201ENST00000453380 819 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXN1O15353 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXN1O15353 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXN1O15353 SLC25A47P1-201ENST00000531577 414 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXN1O15353 MIR3909-201ENST00000579518 119 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 SPCS2P2-201ENST00000603270 608 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.24■□□□□ 0.67
FOXN1O15353 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXN1O15353 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
FOXN1O15353 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FOXN1O15353 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXN1O15353 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXN1O15353 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXN1O15353 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXN1O15353 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXN1O15353 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms