Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
O00370 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.28■□□□□ 0.36
O00370 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
O00370 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.27■□□□□ 0.36
O00370 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
O00370 HLA-H-201ENST00000383620 1096 ntBASIC17.27■□□□□ 0.36
O00370 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.27■□□□□ 0.36
O00370 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.27■□□□□ 0.36
O00370 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
O00370 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 AC061975.2-201ENST00000581722 295 ntBASIC17.27■□□□□ 0.36
O00370 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.27■□□□□ 0.36
O00370 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.27■□□□□ 0.36
O00370 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
O00370 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
O00370 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.27■□□□□ 0.36
O00370 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
O00370 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
O00370 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.27■□□□□ 0.35
O00370 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.27■□□□□ 0.35
O00370 AP3S2-216ENST00000617003 1561 ntBASIC17.27■□□□□ 0.35
O00370 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
O00370 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
O00370 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.27■□□□□ 0.35
O00370 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
O00370 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
O00370 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
O00370 AC092850.2-201ENST00000623821 2697 ntBASIC17.26■□□□□ 0.35
O00370 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
O00370 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
O00370 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.26■□□□□ 0.35
O00370 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 ALG1L8P-201ENST00000533887 760 ntBASIC17.26■□□□□ 0.35
O00370 RARRES2P9-201ENST00000565168 469 ntBASIC17.26■□□□□ 0.35
O00370 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
O00370 MIR4321-201ENST00000592276 80 ntBASIC17.26■□□□□ 0.35
O00370 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
O00370 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
O00370 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
O00370 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
O00370 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
O00370 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.26■□□□□ 0.35
O00370 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.26■□□□□ 0.35
O00370 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
O00370 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
O00370 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.25■□□□□ 0.35
O00370 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 RBPMS2P1-201ENST00000437762 623 ntBASIC17.25■□□□□ 0.35
O00370 SPDYE14P-201ENST00000442619 822 ntBASIC17.25■□□□□ 0.35
O00370 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.25■□□□□ 0.35
O00370 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 AC104640.1-201ENST00000562617 2109 ntBASIC17.25■□□□□ 0.35
O00370 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms