Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC040169.1-201ENST00000565382 521 ntBASIC15.9■□□□□ 0.14
CDC7O00311 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.9■□□□□ 0.14
CDC7O00311 AC027307.2-201ENST00000591252 911 ntBASIC15.9■□□□□ 0.14
CDC7O00311 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDC7O00311 LINC00554-201ENST00000564841 3011 ntBASIC15.9■□□□□ 0.14
CDC7O00311 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDC7O00311 AKAP8P1-201ENST00000434743 1349 ntBASIC15.9■□□□□ 0.14
CDC7O00311 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC7O00311 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC7O00311 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDC7O00311 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 ADH5P3-201ENST00000433842 1137 ntBASIC15.89■□□□□ 0.13
CDC7O00311 AC245100.5-201ENST00000452108 331 ntBASIC15.89■□□□□ 0.13
CDC7O00311 KRT18P58-201ENST00000527480 1120 ntBASIC15.89■□□□□ 0.13
CDC7O00311 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC7O00311 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC7O00311 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC7O00311 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CDC7O00311 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC7O00311 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC7O00311 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC7O00311 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC7O00311 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC7O00311 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDC7O00311 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDC7O00311 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 MCCD1P2-201ENST00000423228 335 ntBASIC15.88■□□□□ 0.13
CDC7O00311 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.88■□□□□ 0.13
CDC7O00311 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 AC105233.2-201ENST00000523697 349 ntBASIC15.88■□□□□ 0.13
CDC7O00311 AF228730.5-201ENST00000530288 346 ntBASIC15.88■□□□□ 0.13
CDC7O00311 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC7O00311 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDC7O00311 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CDC7O00311 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms