Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NFKBIEO00221 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NFKBIEO00221 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.19■□□□□ 0.66
NFKBIEO00221 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NFKBIEO00221 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NFKBIEO00221 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
NFKBIEO00221 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.18■□□□□ 0.66
NFKBIEO00221 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.18■□□□□ 0.66
NFKBIEO00221 FTLP10-202ENST00000505798 471 ntBASIC19.18■□□□□ 0.66
NFKBIEO00221 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 AC126915.1-201ENST00000522847 1038 ntBASIC19.18■□□□□ 0.66
NFKBIEO00221 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
NFKBIEO00221 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
NFKBIEO00221 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.18■□□□□ 0.66
NFKBIEO00221 AC097359.3-201ENST00000603982 1210 ntBASIC19.18■□□□□ 0.66
NFKBIEO00221 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.18■□□□□ 0.66
NFKBIEO00221 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.18■□□□□ 0.66
NFKBIEO00221 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NFKBIEO00221 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
NFKBIEO00221 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.18■□□□□ 0.66
NFKBIEO00221 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NFKBIEO00221 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKBIEO00221 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NFKBIEO00221 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.17■□□□□ 0.66
NFKBIEO00221 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 CD8B2-202ENST00000417670 633 ntBASIC19.17■□□□□ 0.66
NFKBIEO00221 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKBIEO00221 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKBIEO00221 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.17■□□□□ 0.66
NFKBIEO00221 RN7SL720P-201ENST00000488178 304 ntBASIC19.17■□□□□ 0.66
NFKBIEO00221 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NFKBIEO00221 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKBIEO00221 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.17■□□□□ 0.66
NFKBIEO00221 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.17■□□□□ 0.66
NFKBIEO00221 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 KRT8P35-201ENST00000483942 1338 ntBASIC19.17■□□□□ 0.66
NFKBIEO00221 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NFKBIEO00221 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NFKBIEO00221 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NFKBIEO00221 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
NFKBIEO00221 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NFKBIEO00221 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFKBIEO00221 CNN2P10-201ENST00000443067 918 ntBASIC19.16■□□□□ 0.66
NFKBIEO00221 GAPDHP40-201ENST00000505218 1006 ntBASIC19.16■□□□□ 0.66
NFKBIEO00221 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.16■□□□□ 0.66
NFKBIEO00221 KRT18P25-201ENST00000508931 1278 ntBASIC19.16■□□□□ 0.66
NFKBIEO00221 AC245884.6-201ENST00000515672 1067 ntBASIC19.16■□□□□ 0.66
NFKBIEO00221 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.16■□□□□ 0.66
NFKBIEO00221 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NFKBIEO00221 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.16■□□□□ 0.66
NFKBIEO00221 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.16■□□□□ 0.66
NFKBIEO00221 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.16■□□□□ 0.66
NFKBIEO00221 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
NFKBIEO00221 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.16■□□□□ 0.66
NFKBIEO00221 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms