Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 AC099398.1-201ENST00000567919 2776 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AC004890.2-204ENST00000481968 304 ntBASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AL118508.1-201ENST00000613502 2345 ntBASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA2E9PIF3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AL035456.1-201ENST00000456064 1369 ntBASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC015922.1-201ENST00000421102 1152 ntBASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AL589739.1-201ENST00000607720 493 ntBASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms