Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AL691432.1-201ENST00000596308 1422 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 HIST3H2BA-201ENST00000436555 524 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 GPR53P-205ENST00000457298 1084 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AC132938.2-201ENST00000579188 680 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AC025048.3-201ENST00000590609 569 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AC005702.4-201ENST00000618393 416 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 IGHV3-72-202ENST00000621503 303 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 AL591163.1-201ENST00000641757 987 ntBASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
TBC1D3BA6NDS4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AL592424.1-201ENST00000563624 1536 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AC004987.2-201ENST00000395959 1148 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 U91328.1-201ENST00000437528 223 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 ATP5G2P4-201ENST00000442175 420 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AC092337.1-201ENST00000568699 1129 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 AC099568.2-201ENST00000609194 695 ntBASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.36■□□□□ 0.21
TBC1D3BA6NDS4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3BA6NDS4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms