Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC66A2RUB6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 PAWRP1-201ENST00000451083 565 ntBASIC17.63■□□□□ 0.41
CCDC66A2RUB6 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 GGT3P-204ENST00000453783 1664 ntBASIC17.63■□□□□ 0.41
CCDC66A2RUB6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC66A2RUB6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AC087386.2-201ENST00000623212 4637 ntBASIC17.62■□□□□ 0.41
CCDC66A2RUB6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC66A2RUB6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 SNX33P1-201ENST00000592116 1762 ntBASIC17.61■□□□□ 0.41
CCDC66A2RUB6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms