Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 DGCR5-201ENST00000399539 862 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 AC007274.1-201ENST00000439805 662 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 AC123567.1-201ENST00000548294 1261 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 AC027307.3-201ENST00000594262 1100 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 KRT18P43-201ENST00000469825 1281 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.59■■□□□ 1.37
HFM1A2PYH4 AC036164.1-201ENST00000570544 333 ntBASIC23.59■■□□□ 1.37
HFM1A2PYH4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
HFM1A2PYH4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
HFM1A2PYH4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
HFM1A2PYH4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
HFM1A2PYH4 OR8S1-201ENST00000310194 1080 ntBASIC23.58■■□□□ 1.36
HFM1A2PYH4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 TIMM17BP1-201ENST00000545713 516 ntBASIC23.58■■□□□ 1.36
HFM1A2PYH4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 BRI3BPP1-201ENST00000594224 787 ntBASIC23.58■■□□□ 1.36
HFM1A2PYH4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC23.58■■□□□ 1.36
HFM1A2PYH4 RPSAP52-203ENST00000622976 1023 ntBASIC23.58■■□□□ 1.36
HFM1A2PYH4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HFM1A2PYH4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 AL121723.1-201ENST00000445194 1519 ntBASIC23.57■■□□□ 1.36
HFM1A2PYH4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 CTBP2P3-201ENST00000585629 1255 ntBASIC23.57■■□□□ 1.36
HFM1A2PYH4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
HFM1A2PYH4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HFM1A2PYH4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HFM1A2PYH4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HFM1A2PYH4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HFM1A2PYH4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HFM1A2PYH4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HFM1A2PYH4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC23.56■■□□□ 1.36
HFM1A2PYH4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
HFM1A2PYH4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC23.56■■□□□ 1.36
HFM1A2PYH4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
HFM1A2PYH4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms