Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL139400.1-201ENST00000366220 510 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL627223.1-201ENST00000416693 442 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRT18P32-201ENST00000424695 1287 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC079140.1-201ENST00000508039 487 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC024909.3-201ENST00000611513 2257 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL512652.2-201ENST00000625156 1716 ntBASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL031731.1-201ENST00000642131 2094 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ADH5P3-201ENST00000433842 1137 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FAM86GP-201ENST00000448322 971 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HLA-J-203ENST00000494367 1087 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MPDU1-223ENST00000582151 728 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL031055.1-201ENST00000606362 631 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 UXT-AS1-201ENST00000590504 1525 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms