Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 FAM197Y7-201ENST00000432892 766 ntBASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
BIVM-ERCC5R4GMW8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
BIVM-ERCC5R4GMW8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 NME6-203ENST00000415644 849 ntTSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 C2orf27AP3-201ENST00000434123 579 ntBASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AC091804.1-201ENST00000486888 567 ntBASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AC103810.3-201ENST00000583567 96 ntBASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AL354718.3-201ENST00000616414 581 ntBASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 CR382287.1-201ENST00000623954 586 ntBASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC26.33■■□□□ 1.81
BIVM-ERCC5R4GMW8 AC018892.3-201ENST00000623986 2499 ntBASIC26.33■■□□□ 1.8
BIVM-ERCC5R4GMW8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 AGER-203ENST00000375065 665 ntTSL 2 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 AL008638.5-201ENST00000623814 1298 ntBASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC26.32■■□□□ 1.8
BIVM-ERCC5R4GMW8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC26.31■■□□□ 1.8
BIVM-ERCC5R4GMW8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms