Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.84■□□□□ 0.13
CSNK1G3Q9Y6M4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSNK1G3Q9Y6M4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 OR8S1-201ENST00000310194 1080 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 SPDYE19P-201ENST00000338590 713 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 GNAQP1-201ENST00000444815 1067 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AC138969.3-201ENST00000546612 1459 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AC138932.2-201ENST00000548268 1459 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AC126755.4-201ENST00000549796 1459 ntBASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CSNK1G3Q9Y6M4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 U82695.1-201ENST00000635752 1889 ntBASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 AC105020.1-201ENST00000435356 2205 ntBASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 AC005915.1-201ENST00000624912 2018 ntBASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1G3Q9Y6M4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1G3Q9Y6M4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms