Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLIC4Q9Y696 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC4Q9Y696 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC4Q9Y696 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLIC4Q9Y696 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLIC4Q9Y696 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AL355306.1-201ENST00000415580 579 ntBASIC18.47■□□□□ 0.55
CLIC4Q9Y696 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AL671277.1-201ENST00000429656 993 ntBASIC18.47■□□□□ 0.55
CLIC4Q9Y696 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AL135744.1-201ENST00000565098 629 ntBASIC18.47■□□□□ 0.55
CLIC4Q9Y696 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.47■□□□□ 0.55
CLIC4Q9Y696 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLIC4Q9Y696 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TFAMP1-201ENST00000412727 736 ntBASIC18.46■□□□□ 0.55
CLIC4Q9Y696 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 SPTSSB-204ENST00000617024 1292 ntBASIC18.46■□□□□ 0.55
CLIC4Q9Y696 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 AC011477.6-201ENST00000604980 1927 ntBASIC18.46■□□□□ 0.55
CLIC4Q9Y696 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLIC4Q9Y696 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CLIC4Q9Y696 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AC136621.1-201ENST00000624017 2304 ntBASIC18.45■□□□□ 0.54
CLIC4Q9Y696 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ADH5P3-201ENST00000433842 1137 ntBASIC18.45■□□□□ 0.54
CLIC4Q9Y696 FAM58CP-201ENST00000435741 640 ntBASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AC061975.2-201ENST00000581722 295 ntBASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AC027307.2-201ENST00000591252 911 ntBASIC18.45■□□□□ 0.54
CLIC4Q9Y696 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms