Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HCFC2Q9Y5Z7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HCFC2Q9Y5Z7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AC092933.1-201ENST00000393644 945 ntBASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 BCYRN1-201ENST00000418539 200 ntBASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AL355864.2-201ENST00000447420 863 ntBASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AP000812.2-201ENST00000538934 718 ntBASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.76■□□□□ 0.27
HCFC2Q9Y5Z7 AC009053.2-201ENST00000563701 2365 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 TOMM22P5-201ENST00000416399 439 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AC245100.5-201ENST00000452108 331 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 RPL13AP25-201ENST00000484130 612 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AC108725.1-201ENST00000495472 409 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AC244093.1-201ENST00000610837 814 ntBASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HCFC2Q9Y5Z7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms