Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TSPY12P-201ENST00000421279 868 ntBASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 MIR3917-201ENST00000580971 93 ntBASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH1Q9Y2L9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 AC097374.2-201ENST00000618617 1306 ntBASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 AC112907.2-201ENST00000448639 330 ntBASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH1Q9Y2L9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH1Q9Y2L9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms