Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPH3AQ9Y2J0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 RBPMS2P1-201ENST00000437762 623 ntBASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 KRT8P23-201ENST00000560090 1207 ntBASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AP000842.3-202ENST00000569238 1080 ntBASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC138761.1-201ENST00000584393 385 ntBASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPH3AQ9Y2J0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 ME2P1-201ENST00000426028 1970 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AL139400.1-201ENST00000366220 510 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC105233.2-201ENST00000523697 349 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AF228730.5-201ENST00000530288 346 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC093028.1-201ENST00000622998 982 ntBASIC14.91□□□□□ -0.02
RPH3AQ9Y2J0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms