Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 BTBD7P1-201ENST00000447253 1453 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 AC009118.2-201ENST00000613275 655 ntBASIC17.04■□□□□ 0.32
CDH9Q9ULB4 AC008761.3-201ENST00000624803 892 ntBASIC17.04■□□□□ 0.32
CDH9Q9ULB4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 AL596087.1-201ENST00000400979 1969 ntBASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.04■□□□□ 0.32
CDH9Q9ULB4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SDHAP3-202ENST00000515467 728 ntBASIC17.03■□□□□ 0.32
CDH9Q9ULB4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AC044860.1-202ENST00000559481 777 ntBASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 LINC02084-201ENST00000606069 1096 ntBASIC17.03■□□□□ 0.32
CDH9Q9ULB4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH9Q9ULB4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 AL662844.4-201ENST00000606367 2838 ntBASIC17.02■□□□□ 0.32
CDH9Q9ULB4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms