Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 FAM207CP-201ENST00000443486 507 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SERBP1P5-201ENST00000510079 1181 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AC008738.7-201ENST00000609744 511 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 KRT8P12-202ENST00000472924 1397 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 AL596087.1-201ENST00000400979 1969 ntBASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMG20BQ9P0W2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 AC010336.2-201ENST00000564226 506 ntBASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.65■□□□□ 0.74
HMG20BQ9P0W2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMG20BQ9P0W2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 AC018695.7-201ENST00000624587 2492 ntBASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMG20BQ9P0W2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 CYP4F24P-201ENST00000586049 1580 ntBASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 AC004840.1-201ENST00000636359 365 ntBASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms