Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.18■□□□□ 0.34
CXXC1Q9P0U4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 C2orf27AP3-201ENST00000434123 579 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 Z93015.1-201ENST00000451718 390 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 MPRIPP1-201ENST00000452433 1089 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AKR7A2P1-201ENST00000460134 915 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AC023310.1-201ENST00000554836 735 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 LETM1P2-201ENST00000597330 2178 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AL354718.3-201ENST00000616414 581 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 CR382287.1-201ENST00000623954 586 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 AC009053.2-201ENST00000563701 2365 ntBASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CXXC1Q9P0U4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 AL591846.1-201ENST00000451736 433 ntBASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 AC105129.2-201ENST00000559536 390 ntBASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 LINC01144-201ENST00000626198 1710 ntBASIC17.16■□□□□ 0.34
CXXC1Q9P0U4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 MIR4741-201ENST00000579822 90 ntBASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 AC005695.3-201ENST00000614522 232 ntBASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.15■□□□□ 0.34
CXXC1Q9P0U4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms