Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ECHDC1Q9NTX5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 TUBB3P1-201ENST00000405796 1332 ntBASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ECHDC1Q9NTX5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ECHDC1Q9NTX5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 AC051619.7-201ENST00000568314 623 ntBASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 AC022188.1-201ENST00000620960 1664 ntBASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ECHDC1Q9NTX5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms