Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CTNNBIP1Q9NSA3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 AP002414.2-201ENST00000591780 3365 ntBASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
CTNNBIP1Q9NSA3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 AL121772.3-201ENST00000610840 674 ntBASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 AC020658.6-201ENST00000623564 1870 ntBASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SSR4P1-203ENST00000599569 2260 ntBASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTNNBIP1Q9NSA3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AL358472.4-201ENST00000633140 710 ntBASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 SBF1P1-201ENST00000444527 5631 ntBASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTNNBIP1Q9NSA3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms