Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C12orf4Q9NQ89 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 POM121L3P-201ENST00000419331 1163 ntBASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AP002414.4-201ENST00000589764 1148 ntBASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AC010331.1-201ENST00000611423 582 ntBASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AL139011.1-202ENST00000642063 584 ntBASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.21□□□□□ -0.13
C12orf4Q9NQ89 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C12orf4Q9NQ89 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 IGHV3-47-201ENST00000425060 335 ntBASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 FAM86EP-206ENST00000510506 987 ntBASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC074051.2-201ENST00000565115 352 ntBASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC092329.2-201ENST00000598402 547 ntBASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC013467.2-201ENST00000605472 835 ntBASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.2□□□□□ -0.14
C12orf4Q9NQ89 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms