Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC004899.1-201ENST00000424687 1714 ntBASIC14.73□□□□□ -0.05
CHD8Q9HCK8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC011742.3-201ENST00000439053 820 ntBASIC14.73□□□□□ -0.05
CHD8Q9HCK8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.73□□□□□ -0.05
CHD8Q9HCK8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 AC132938.4-201ENST00000623835 848 ntBASIC14.73□□□□□ -0.05
CHD8Q9HCK8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHD8Q9HCK8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 KRT8P39-201ENST00000396270 1433 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 BRI3P1-201ENST00000440440 378 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 FAM86KP-201ENST00000509817 987 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SAMD11P1-201ENST00000571429 661 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 MME-218ENST00000625667 363 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 HIST2H2BB-201ENST00000449108 381 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 IGHV3-37-201ENST00000518544 340 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC105137.3-201ENST00000617588 984 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 AC103691.2-201ENST00000618824 433 ntBASIC14.72□□□□□ -0.05
CHD8Q9HCK8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHD8Q9HCK8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 RN7SKP214-201ENST00000364208 315 ntBASIC14.71□□□□□ -0.05
CHD8Q9HCK8 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms