Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 FAAHP1-202ENST00000446499 1238 ntBASIC15.03■□□□□ -0
POLR2J3Q9H1A7 AC245100.5-201ENST00000452108 331 ntBASIC15.03■□□□□ -0
POLR2J3Q9H1A7 EMBP1-201ENST00000458200 901 ntBASIC15.03■□□□□ -0
POLR2J3Q9H1A7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 MIR4751-201ENST00000578027 74 ntBASIC15.03■□□□□ -0
POLR2J3Q9H1A7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.03■□□□□ -0
POLR2J3Q9H1A7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 MST1L-201ENST00000442552 2185 ntBASIC15.02■□□□□ -0
POLR2J3Q9H1A7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AL513480.1-201ENST00000451731 511 ntBASIC15.02■□□□□ -0
POLR2J3Q9H1A7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AL773604.1-201ENST00000617417 272 ntBASIC15.02■□□□□ -0
POLR2J3Q9H1A7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.02■□□□□ -0
POLR2J3Q9H1A7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.02□□□□□ -0.01
POLR2J3Q9H1A7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 AC013268.4-201ENST00000637413 2228 ntBASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 AP003680.1-201ENST00000598970 3660 ntBASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 VN2R19P-201ENST00000442399 1052 ntBASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
POLR2J3Q9H1A7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms