Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCGF1Q9BSM1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AC006538.1-201ENST00000567905 1585 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AC016027.1-202ENST00000607927 1699 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 DBET-201ENST00000630918 3363 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AL627223.1-201ENST00000416693 442 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 AC243562.1-201ENST00000560672 389 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 MIR3909-201ENST00000579518 119 ntBASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
PCGF1Q9BSM1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 HLA-A-202ENST00000376806 1854 ntBASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 AL645939.2-201ENST00000427340 991 ntBASIC13.65□□□□□ -0.22
PCGF1Q9BSM1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms