Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.36□□□□□ -0.43
VGLL1Q99990 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.36□□□□□ -0.43
VGLL1Q99990 REXO1L6P-202ENST00000619970 1078 ntBASIC12.36□□□□□ -0.43
VGLL1Q99990 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
VGLL1Q99990 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
VGLL1Q99990 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
VGLL1Q99990 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
VGLL1Q99990 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
VGLL1Q99990 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.35□□□□□ -0.43
VGLL1Q99990 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
VGLL1Q99990 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 MIR648-201ENST00000385046 94 ntBASIC12.35□□□□□ -0.43
VGLL1Q99990 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.35□□□□□ -0.43
VGLL1Q99990 TSPY19P-201ENST00000418461 509 ntBASIC12.35□□□□□ -0.43
VGLL1Q99990 TSPY18P-201ENST00000441642 509 ntBASIC12.35□□□□□ -0.43
VGLL1Q99990 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.35□□□□□ -0.43
VGLL1Q99990 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.35□□□□□ -0.43
VGLL1Q99990 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.35□□□□□ -0.43
VGLL1Q99990 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 AC107918.4-202ENST00000641623 219 ntBASIC12.35□□□□□ -0.43
VGLL1Q99990 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.35□□□□□ -0.43
VGLL1Q99990 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
VGLL1Q99990 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
VGLL1Q99990 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VGLL1Q99990 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.34□□□□□ -0.43
VGLL1Q99990 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
VGLL1Q99990 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.34□□□□□ -0.43
VGLL1Q99990 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VGLL1Q99990 AL592424.1-201ENST00000563624 1536 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms