Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ZNF890P-202ENST00000530367 1156 ntBASIC16.91■□□□□ 0.3
SMOQ99835 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.91■□□□□ 0.3
SMOQ99835 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.91■□□□□ 0.3
SMOQ99835 AC004840.1-201ENST00000636359 365 ntBASIC16.91■□□□□ 0.3
SMOQ99835 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.91■□□□□ 0.3
SMOQ99835 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SMOQ99835 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.91■□□□□ 0.3
SMOQ99835 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SMOQ99835 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMOQ99835 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.9■□□□□ 0.3
SMOQ99835 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SMOQ99835 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SMOQ99835 FO393414.2-201ENST00000405153 598 ntBASIC16.9■□□□□ 0.3
SMOQ99835 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.9■□□□□ 0.3
SMOQ99835 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 AC044860.1-202ENST00000559481 777 ntBASIC16.9■□□□□ 0.3
SMOQ99835 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.9■□□□□ 0.3
SMOQ99835 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.9■□□□□ 0.3
SMOQ99835 RN7SL204P-201ENST00000582831 262 ntBASIC16.9■□□□□ 0.3
SMOQ99835 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.9■□□□□ 0.3
SMOQ99835 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.9■□□□□ 0.3
SMOQ99835 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
SMOQ99835 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMOQ99835 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.9■□□□□ 0.3
SMOQ99835 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMOQ99835 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMOQ99835 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMOQ99835 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.3
SMOQ99835 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.89■□□□□ 0.3
SMOQ99835 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMOQ99835 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SMOQ99835 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 AC236430.1-201ENST00000402231 743 ntBASIC16.89■□□□□ 0.29
SMOQ99835 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.89■□□□□ 0.29
SMOQ99835 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.89■□□□□ 0.29
SMOQ99835 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.89■□□□□ 0.29
SMOQ99835 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.89■□□□□ 0.29
SMOQ99835 MIR6069-201ENST00000620069 79 ntBASIC16.89■□□□□ 0.29
SMOQ99835 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.89■□□□□ 0.29
SMOQ99835 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMOQ99835 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
SMOQ99835 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMOQ99835 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
SMOQ99835 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms