Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIPA1Q96FS4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SIPA1Q96FS4 CYP4F24P-201ENST00000586049 1580 ntBASIC16.21■□□□□ 0.18
SIPA1Q96FS4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIPA1Q96FS4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SIPA1Q96FS4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIPA1Q96FS4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AL512384.1-201ENST00000406683 331 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 TIMM17BP1-201ENST00000545713 516 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC023310.3-201ENST00000557027 670 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC100756.1-201ENST00000562736 682 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 WASH4P-201ENST00000564273 1246 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC138749.3-201ENST00000567691 622 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 AC116165.1-201ENST00000611806 668 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 HLA-A-202ENST00000376806 1854 ntBASIC16.2■□□□□ 0.18
SIPA1Q96FS4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIPA1Q96FS4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 RNF216P1-203ENST00000404404 2427 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 U91328.1-201ENST00000437528 223 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 MYCLP2-201ENST00000449268 967 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 AL589987.1-201ENST00000453380 819 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 GPR53P-205ENST00000457298 1084 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 POU5F1P6-201ENST00000466990 990 ntBASIC16.19■□□□□ 0.18
SIPA1Q96FS4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIPA1Q96FS4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms