Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.89□□□□□ -0.19
USP9XQ93008 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.89□□□□□ -0.19
USP9XQ93008 MIR769-201ENST00000390225 118 ntBASIC13.89□□□□□ -0.19
USP9XQ93008 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 EEF1DP6-201ENST00000449232 372 ntBASIC13.89□□□□□ -0.19
USP9XQ93008 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.89□□□□□ -0.19
USP9XQ93008 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.89□□□□□ -0.19
USP9XQ93008 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.89□□□□□ -0.19
USP9XQ93008 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.89□□□□□ -0.19
USP9XQ93008 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 AF254983.2-201ENST00000612331 135 ntBASIC13.89□□□□□ -0.19
USP9XQ93008 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 AC009053.2-201ENST00000563701 2365 ntBASIC13.89□□□□□ -0.19
USP9XQ93008 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
USP9XQ93008 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 BICD1-207ENST00000551848 1962 ntBASIC13.89□□□□□ -0.19
USP9XQ93008 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
USP9XQ93008 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
USP9XQ93008 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.88□□□□□ -0.19
USP9XQ93008 NUP210P1-202ENST00000504322 710 ntBASIC13.88□□□□□ -0.19
USP9XQ93008 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.88□□□□□ -0.19
USP9XQ93008 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
USP9XQ93008 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 AC006480.2-201ENST00000609770 1337 ntBASIC13.88□□□□□ -0.19
USP9XQ93008 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 FAM197Y7-201ENST00000432892 766 ntBASIC13.88□□□□□ -0.19
USP9XQ93008 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.88□□□□□ -0.19
USP9XQ93008 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
USP9XQ93008 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.88□□□□□ -0.19
USP9XQ93008 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.88□□□□□ -0.19
USP9XQ93008 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
USP9XQ93008 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.87□□□□□ -0.19
USP9XQ93008 AC022217.1-201ENST00000521069 738 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 CU633904.3-201ENST00000624042 1029 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 AL138709.1-201ENST00000614840 1693 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
USP9XQ93008 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 AL138781.2-201ENST00000617896 1843 ntBASIC13.87□□□□□ -0.19
USP9XQ93008 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.87□□□□□ -0.19
USP9XQ93008 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
USP9XQ93008 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms