Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 AL627223.1-201ENST00000416693 442 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 FAM58DP-201ENST00000428076 619 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 RARRES2P9-201ENST00000565168 469 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC3Q92529 MIR3687-2-201ENST00000577708 61 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
SHC3Q92529 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC3Q92529 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC3Q92529 MIR3687-1-201ENST00000614492 61 ntBASIC17.24■□□□□ 0.35
SHC3Q92529 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC3Q92529 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SHC3Q92529 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC3Q92529 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC3Q92529 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC3Q92529 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.23■□□□□ 0.35
SHC3Q92529 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 AC005237.2-201ENST00000434368 219 ntBASIC17.23■□□□□ 0.35
SHC3Q92529 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC3Q92529 AP000344.2-201ENST00000512987 629 ntBASIC17.23■□□□□ 0.35
SHC3Q92529 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC3Q92529 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC3Q92529 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.23■□□□□ 0.35
SHC3Q92529 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SHC3Q92529 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHC3Q92529 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC3Q92529 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC3Q92529 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SHC3Q92529 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC3Q92529 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SHC3Q92529 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC3Q92529 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 AC004987.2-201ENST00000395959 1148 ntBASIC17.22■□□□□ 0.35
SHC3Q92529 GPS2P2-201ENST00000430745 888 ntBASIC17.22■□□□□ 0.35
SHC3Q92529 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.22■□□□□ 0.35
SHC3Q92529 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC3Q92529 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SHC3Q92529 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC3Q92529 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC3Q92529 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC3Q92529 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SHC3Q92529 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SHC3Q92529 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SHC3Q92529 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC3Q92529 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.21■□□□□ 0.35
SHC3Q92529 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms