Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX1Q92499 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 AC134407.2-201ENST00000625089 1978 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX1Q92499 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DDX1Q92499 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
DDX1Q92499 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX1Q92499 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.21■□□□□ 0.35
DDX1Q92499 BASP1P1-201ENST00000430708 665 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 TIMM8BP1-201ENST00000452384 211 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX1Q92499 AC093214.1-201ENST00000511688 1107 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.21■□□□□ 0.35
DDX1Q92499 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.21■□□□□ 0.35
DDX1Q92499 AC105339.1-204ENST00000636249 355 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 AL358472.5-202ENST00000641448 1267 ntBASIC17.21■□□□□ 0.35
DDX1Q92499 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX1Q92499 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DDX1Q92499 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DDX1Q92499 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DDX1Q92499 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DDX1Q92499 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
DDX1Q92499 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.21■□□□□ 0.34
DDX1Q92499 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX1Q92499 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX1Q92499 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX1Q92499 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 AC004461.1-201ENST00000412461 403 ntBASIC17.2■□□□□ 0.34
DDX1Q92499 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX1Q92499 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX1Q92499 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.2■□□□□ 0.34
DDX1Q92499 AC022145.2-201ENST00000598203 171 ntBASIC17.2■□□□□ 0.34
DDX1Q92499 AL008721.1-201ENST00000609964 604 ntBASIC17.2■□□□□ 0.34
DDX1Q92499 MIR6752-201ENST00000618442 71 ntBASIC17.2■□□□□ 0.34
DDX1Q92499 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.2■□□□□ 0.34
DDX1Q92499 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.2■□□□□ 0.34
DDX1Q92499 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DDX1Q92499 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DDX1Q92499 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 AP001282.1-201ENST00000531301 1499 ntBASIC17.19■□□□□ 0.34
DDX1Q92499 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DDX1Q92499 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.19■□□□□ 0.34
DDX1Q92499 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.19■□□□□ 0.34
DDX1Q92499 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms