Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40AQ8WXH6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MIR940-201ENST00000401276 94 ntBASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 AC027601.4-201ENST00000611259 610 ntBASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40AQ8WXH6 LINC02228-204ENST00000642115 2962 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AC006504.4-201ENST00000592118 1568 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AC016027.1-202ENST00000607927 1699 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 LINC00982-205ENST00000420957 435 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AL591424.1-201ENST00000442569 1213 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AC034105.1-201ENST00000563488 319 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PMS2P7-201ENST00000506558 1336 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PRAL-201ENST00000624952 3286 ntBASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40AQ8WXH6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40AQ8WXH6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40AQ8WXH6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms