Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC079140.1-201ENST00000508039 487 ntBASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AL365330.1-201ENST00000607459 531 ntBASIC16.48■□□□□ 0.23
PTCD2Q8WV60 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AL161645.1-201ENST00000622716 1255 ntBASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC009118.3-201ENST00000622896 873 ntBASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 AC007950.2-201ENST00000615045 2347 ntBASIC16.48■□□□□ 0.23
PTCD2Q8WV60 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTCD2Q8WV60 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC245100.5-201ENST00000452108 331 ntBASIC16.47■□□□□ 0.23
PTCD2Q8WV60 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 RARRES2P8-201ENST00000566335 367 ntBASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC027796.2-201ENST00000575326 344 ntBASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 CDC14C-201ENST00000428251 1719 ntBASIC16.47■□□□□ 0.23
PTCD2Q8WV60 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTCD2Q8WV60 LINC02199-201ENST00000506655 2702 ntBASIC16.47■□□□□ 0.23
PTCD2Q8WV60 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.46■□□□□ 0.23
PTCD2Q8WV60 AC069224.1-201ENST00000566372 1715 ntBASIC16.46■□□□□ 0.23
PTCD2Q8WV60 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms