Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 CDC14C-201ENST00000428251 1719 ntBASIC12.68□□□□□ -0.38
C3orf56Q8N813 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
C3orf56Q8N813 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 AC018695.7-201ENST00000624587 2492 ntBASIC12.67□□□□□ -0.38
C3orf56Q8N813 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TDH-203ENST00000531764 1110 ntBASIC12.67□□□□□ -0.38
C3orf56Q8N813 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 RARRES2P5-201ENST00000564013 466 ntBASIC12.67□□□□□ -0.38
C3orf56Q8N813 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 AC133539.2-201ENST00000604757 467 ntBASIC12.67□□□□□ -0.38
C3orf56Q8N813 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.67□□□□□ -0.38
C3orf56Q8N813 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
C3orf56Q8N813 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC093525.9-201ENST00000624961 1746 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC099336.1-201ENST00000417053 1171 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC108725.1-201ENST00000495472 409 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 USP32P1-208ENST00000506594 1164 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 MIR3615-201ENST00000581999 87 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 AC010328.2-201ENST00000597698 1111 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.66□□□□□ -0.38
C3orf56Q8N813 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
C3orf56Q8N813 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
C3orf56Q8N813 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms