Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 CNN2P11-201ENST00000429351 262 ntBASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ATPAF2Q8N5M1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC023141.5-201ENST00000458585 616 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC093520.2-201ENST00000561830 333 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 SNHG9-202ENST00000564014 471 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC061975.2-201ENST00000581722 295 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 AL603832.2-201ENST00000566195 2125 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 FLJ16779-201ENST00000612722 7638 ntBASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.61■□□□□ 0.25
ATPAF2Q8N5M1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATPAF2Q8N5M1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms