Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 KLF2P4-201ENST00000451959 1225 ntBASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 CTBP2P5-201ENST00000454986 1264 ntBASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NPAS4Q8IUM7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 FAM86MP-201ENST00000340703 885 ntBASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 AC134915.1-201ENST00000426461 574 ntBASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 MIR4525-201ENST00000580000 75 ntBASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 INTS4P2-202ENST00000614726 2019 ntBASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NPAS4Q8IUM7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms