Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ACTBP11-201ENST00000436287 1126 ntBASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 AC124947.2-201ENST00000547118 1133 ntBASIC17.17■□□□□ 0.34
RNF135Q8IUD6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 AL109936.8-201ENST00000641772 604 ntBASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF135Q8IUD6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 BNIP3P42-201ENST00000454982 569 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 KRT18P34-201ENST00000488218 1270 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 RN7SL219P-201ENST00000582872 296 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 BNIP3P29-201ENST00000598302 571 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 AC011447.5-201ENST00000616168 564 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 FOXO1B-201ENST00000504678 1527 ntBASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF135Q8IUD6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AGGF1P2-201ENST00000426656 2106 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 AC105020.1-201ENST00000435356 2205 ntBASIC17.15■□□□□ 0.34
RNF135Q8IUD6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF135Q8IUD6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms