Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC108751.1-201ENST00000490852 363 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 KRT18P56-201ENST00000507275 550 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AL121912.1-201ENST00000603683 238 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AL031008.1-201ENST00000619963 541 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC005593.1-201ENST00000624894 515 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 AC105250.1-201ENST00000509378 2057 ntBASIC20.22■□□□□ 0.83
SKAP1Q86WV1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SKAP1Q86WV1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 AC112693.3-201ENST00000624819 1983 ntBASIC20.21■□□□□ 0.83
SKAP1Q86WV1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 KRT18P67-201ENST00000432816 1264 ntBASIC20.21■□□□□ 0.83
SKAP1Q86WV1 AC098831.1-202ENST00000438821 336 ntBASIC20.21■□□□□ 0.83
SKAP1Q86WV1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 AC010507.1-201ENST00000633895 436 ntBASIC20.21■□□□□ 0.83
SKAP1Q86WV1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.21■□□□□ 0.83
SKAP1Q86WV1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 AC139749.1-202ENST00000617529 3139 ntBASIC20.2■□□□□ 0.82
SKAP1Q86WV1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 MRPL3P1-201ENST00000400109 1033 ntBASIC20.2■□□□□ 0.82
SKAP1Q86WV1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 RNA5SP419-201ENST00000515908 135 ntBASIC20.2■□□□□ 0.82
SKAP1Q86WV1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SKAP1Q86WV1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.19■□□□□ 0.82
SKAP1Q86WV1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms