Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 MIR5572-201ENST00000583188 137 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AC010328.2-201ENST00000597698 1111 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 REXO1L8P-201ENST00000604378 1897 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AL662890.1-201ENST00000396818 632 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AZGP1P1-201ENST00000411909 902 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 NKAIN1P1-201ENST00000435754 582 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AP001063.1-201ENST00000568332 529 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 AL049840.4-201ENST00000602422 811 ntBASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
VPS13BQ7Z7G8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AL355334.1-201ENST00000417713 215 ntBASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AL355864.2-201ENST00000447420 863 ntBASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC097724.1-201ENST00000609581 426 ntBASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 NUS1P3-201ENST00000423502 862 ntBASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13BQ7Z7G8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms